Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMDIKIKREEIMKKFSKTLRDNWIFLLMVLPGALWLILFFYIPVFGNVVAFKDYHMTSNGFIDSIINSKWVGLDNFRFLFSSRDAFIITRNTVLYNLGFIFLGLVVSVGIAIILSELRSKRMVKIFQTSMLFPYFLSWVIISFFTDAFLNIDKGVFNHLLESL-GLKEVNFYADLGIWPYLLLFLGIWKGFGYSSVMYYATIMGIDPTYYEAATVDGASKWQRIRNVTIPQLTPLVTVLTILAVGNIFRADFGLFYQIPHNAGQLYNVTNVLDVYVFNGLTQTADIGMAAAAGLYQSVVGLILVILSNLLARRVDPNSALF
3PUX Chain:F ((284-431))------------------------------------------------------------------------------------------TVVFSLITVFLTVAVGMVLACLV-QWEALRGKAVYRVLLILPYAVPSFISILIFKGLFNQSFGEINMMLSALFGVKPA-WFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLPLLIKPLTPLMI--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PUX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 409 -77241 -188.85 -525.45
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain F : 0.58

3D Compatibility (PKB) : -188.85
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.212

(partial model without unconserved sides chains):
PDB file : Tito_3PUX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PUX-query.scw
PDB file : Tito_Scwrl_3PUX.pdb: