Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFYSIKELVEQADLDFQGNVAELMITTEFELTGREREEVFLLMERNLEVMKASVQLGLNENKSRSGLTGGDAAKLDHYIENGKTLSDYTILSAARNAIAVNEHNAKMGLVCATPTAGSAGCLPSVLTAAIEKL----------DLSHEQQLDFLFAAGAFGLVIANNASISGAEGGCQAEVGS-ASAMSAAALTLAAGGTPYQASQAIAFVIKNMLGLI-CDP--VAGLVEVPCVKRNAMGASFAFIAADMALAGIESKIPVDEVIDAMYQVGASMPTAFRETAEGGLATTPTGRRLQKEIFGE
1SZQ Chain:B ((116-244))------------------------------------------------------------------------------------------------------------------------NLGGIL-ATADWLSRNAVASGKAPLTMKQVLTAMIKAHEIQGCIALENSFNR-V-G-LD-HVLLVKVASTAVVAEMLGLTREEILNAVSLAWVDGQSLRTYRHAPNTG---TRKSWAAGDATSRAVRLALMAKTGEM-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1SZQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 388 -24642 -63.51 -214.27
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.57

3D Compatibility (PKB) : -63.51
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.322

(partial model without unconserved sides chains):
PDB file : Tito_1SZQ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SZQ-query.scw
PDB file : Tito_Scwrl_1SZQ.pdb: