Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKKIYPIFTILLGAAIYAFGLTYFVVPHHLFEGGATGITLITFYLFKIPVSLMNLLINIPLFILAWKIFGAKSLYSSLLGTLALSAWLAFFEHIPLHIDLQGDLLITALIAGILLGIGLGIIFNAGGTTGGTDILARILNKYTHISIGKLLFILDFCILMLILLIFKDLRLVSYTLLFDFIVSRVIDLIGEGGYAGKGFMIITKR--PDQLAKAINDDLG-RGVTFI-SGQGYYSK---ENLKIIYCIVGRNEIVKTKEMIHRIDP--QAFITITEAHEILGEGFTFEKE
5D4N Chain:B ((10-103))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKLEIILEGAHKEFATDLLDR-AGVKGYTIVGNLSGKGSHGMY-ALIMIIAAVPEELVGPLLEGFQPFFEAHSGVVFVHDIQVGRP--------


General information:
TITO was launched using:
RESULT:

Template: 5D4N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 284 -4308 -15.17 -57.44
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain B : 0.43

3D Compatibility (PKB) : -15.17
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.43
QMean score : 0.610

(partial model without unconserved sides chains):
PDB file : Tito_5D4N.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D4N-query.scw
PDB file : Tito_Scwrl_5D4N.pdb: