Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRIIP----VYIFQQVN----VLLVSL--YLLKFLCI-GELT-----------ILQILYG------SSLISFLWMYGQRKQAHKVNMKSRMKWLGVEFVSLLIISLCFSLIHAQGSTNQANLIGLQHQIPWFSFLLFLIN-----ASMVEEFLYREILCNLVRKLDIRVALTSVLFALAHHTG------------------TILAWCLYVSLGMFL---GMVRY---------KSDLWGSMGLHLVWNLLVYSLLLF--
4XLG Chain:A ((3-300))EFQQIPDFYGCYLLQSISKRQSFYIGSTPNPVRRLRQHNGSLSRTKRDGTRPWEMVAIVYGFPSRIAALQFQHAWQHGTRYISIHHKLAMITSLLKNEYFRYMDLTLHFFNQKVEEIWKNDKFNVSNYTVSLSQDALTEINNDTIDDIMDVNEKNMELVQNLYSTTLAEKTKTLLLYKEKIDTGINTCQFCNKIIKHNNISENLFAFCRDTSCTFVSHLACAYRYFMSEDTIIPQSPKCPKCYTLLKWCDVIYYSIKLNK


General information:
TITO was launched using:
RESULT:

Template: 4XLG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 820 -63642 -77.61 -326.37
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -77.61
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.159

(partial model without unconserved sides chains):
PDB file : Tito_4XLG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XLG-query.scw
PDB file : Tito_Scwrl_4XLG.pdb: