Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMELHFNLELVETYKSNSQKARILTEDWVYRQSYCPNCGNNPLNHFENNRPVADFYCNHCSEEFELKSKKGNFSSTINDGAYATMMKRVQADNNPNFFFLTYTKNFEVNNFLVLPKQFVTPKSIIQRKPLAPTARRAGWIGCNIDLSQVPSKGRIFLVQDGQVRDPEKVTKEFKQGLFLRKSSLSSRGWTIEILNCIDKIEGSEFTLEDMYRFESDLKNIFVKNNHIKEKIRQQLQILRDKEIIEFKGRGKYRKL
5K2M Chain:E ((2-52))-------------------------------VECPVCGSE--IEIGEVELHQIVECPVCGAELEVVSL-EPLTLEELPEVEEDWG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K2M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 148 -12928 -87.35 -253.49
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain E : 0.55

3D Compatibility (PKB) : -87.35
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_5K2M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K2M-query.scw
PDB file : Tito_Scwrl_5K2M.pdb: