Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLSQIDEMLIGDLDLQFVMPWE-FEDLNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNCFFKLVEYMLVVLESRSFTSLFSNCVEFYNTKYSNEYLTFFLNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQLQIIRVM
1FQJ Chain:C ((9-39))-----IPGMEGLGTDITVICPWEAFNHLELHELAQY------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1FQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 36 -1646 -45.72 -54.87
target 2D structure prediction score : 0.43
Monomeric hydrophicity matching model chain C : 0.53

3D Compatibility (PKB) : -45.72
2D Compatibility (Sec. Struct. Predict.) : 0.43
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.359

(partial model without unconserved sides chains):
PDB file : Tito_1FQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1FQJ-query.scw
PDB file : Tito_Scwrl_1FQJ.pdb: