Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEINPNSQQPTGSSL----PTSALGNIQRPGEYLRQIRVSQKKELEQVSSDLNMPLKTLNALEQDDYKSLPE---ATFIKGYYRSYAKYLNTDATAIIQRFDEIYANDTGLLPNHALNNSPIKIMGKLPGSN-----------------------------------SDRNKKWLKRALLAILII-------------AVVSLIVMGVQKWTSNKEDAELP----KANQSNVEVLP---------MKGNASATVGDQLVLNFNRPTSVHIVDATGKVLATGRQASTLTLNGESPFQIRLDDATAVSLSLN---QEQISLSPYTVNG----------KAEFRLSR------------------------------
4CI2 Chain:B ((71-451))-MINFDTSLPTSHMYLGSDMEEFHGRTLHDDDSCQVIPVLPHVMVMLIPGQ-TLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVREREAHFGTTAEIYAYREEQEYGIETVKVKAIGRQRFKVLEIRTQSDGIQQAKVQILPERVLPSTMSAVQLQSLSRRHIRAFRQWWQKYQKRKFHCASLTSWPPWLYSLYDAETLMERVKRQLHEWDENLKDESLPTNPIDFSYRVAACLPIDDALRIQLLKIGSAIQRLRCELDIMNKCTSLCCKQCQDTEITTKNEIFSLSLCG--PMAAYVNPHGYIHETLTVYKACNLNLSGRPSTEHSWFPGYAWTIAQCRICGNHMGWKFTATKKDMSPQKFWGLTRSALLPR


General information:
TITO was launched using:
RESULT:

Template: 4CI2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1115 43020 38.58 166.10
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : 38.58
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.157

(partial model without unconserved sides chains):
PDB file : Tito_4CI2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CI2-query.scw
PDB file : Tito_Scwrl_4CI2.pdb: