Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLQRG-IYQHYKGNLYQVFSVAKHSETEEELVVYQCLYGDYSTWVRPLDMFTETVQMSDGSIVPRFKLIQST
3PAS Chain:D ((40-52))--LSPATLYIYYEDK----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3PAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 6 -817 -136.17 -68.08
target 2D structure prediction score : 0.25
Monomeric hydrophicity matching model chain D : 0.48

3D Compatibility (PKB) : -136.17
2D Compatibility (Sec. Struct. Predict.) : 0.25
1D Compatibility (Hydrophobicity) : 0.48
QMean score : 0.513

(partial model without unconserved sides chains):
PDB file : Tito_3PAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3PAS-query.scw
PDB file : Tito_Scwrl_3PAS.pdb: