Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQDIIAYFIQNLTALYIAVALVSLCIGSFLNVVIYRTPKMMEQDWQQECQMLLNPEQPIIDHEKLTLSKPASSCPACQQPIRWYQNIPVISWLTLRGKCGHCQHPISIRYPAVELLTMLCSLVVVMVFGPTIQMLFGLVLTWVLIALTFIDFDTQLLPDRFTLTLAALGLGINTFNIYTSPNSAIWGYLIGFLCLWIVYYLFKVITGKEGMGYGDFKLLAALGAWMGPLMLPLIVLLSSLLGAIIGIILLKLRNDNQPFAFGPYIAIAGWVAFLWGDQIMKIYLGG
5FLM Chain:L ((16-44))----------------------------------------------------------------------IYICGECHTENEIKS-----R---DPIRCRECGYRIM-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5FLM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 81 -10463 -129.17 -360.79
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain L : 0.36

3D Compatibility (PKB) : -129.17
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.36
QMean score : 0.609

(partial model without unconserved sides chains):
PDB file : Tito_5FLM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5FLM-query.scw
PDB file : Tito_Scwrl_5FLM.pdb: