Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEIVCLDLEGVLVP-EIWINFAKKTGIKE-----LEATTRDIPDYDVLMTQRLNILKQHGLGLKDIQEVIAEMGPLPGAKEFVEWVSNH-FQLVILSDTFYEFAHPLMKQLGWPTIFCHKLETDENGMITAYKLRQPDQKRESVKALHGLNFR-------VIAAGDSYNDTTMLGEADHGFLFDAPANVIAEFPQFPAINGYDALKEAIRSVSQRNIPA
5JMA Chain:A ((178-358))-RLIVFDVDSTLVQGEVIEMLAAKAGAEGQVAAITDAAMRGELDFAQSLQQRVATLA--GLPATVIDEVAGQLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAANELEI-VDGTLTGRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAFNA----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 823 -5365 -6.52 -32.12
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -6.52
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.475

(partial model without unconserved sides chains):
PDB file : Tito_5JMA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JMA-query.scw
PDB file : Tito_Scwrl_5JMA.pdb: