Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGQQLVFKSKNALTDLTAIPDFVSYKSRVESDGGVIYDQQAVLDVLQFIFQNSIPETDILSATSAAWGVKFDPVTKVITKLYNLFN-PAGDIIIQNGTMNAIHTTEVDGKPSLYAGGTSTLYGYSSGKFAIANPIAHTIHHVPARSGYGASALLFPLQTLFNKEGFDASTDPAKVSTDYVAVDQRLTRNATTNNDPNTWNEAHRFWGASVGVDGNLNGSRIGYASNALTTGTFIYKDGAQSNSNSTVPNIKPTQQADQRLYLMSNFTVAGVRGNYYLGYIFENWLLNNGTDSIAKALSLRAKTKYR
5NN9 Chain:A ((131-230))------------------------------------------------------------------------PVTEINTWARNILRTQESECVCHNGVCPVVFT---DG--SATGPAETRIYYFKEGKILKWEPLAGTAKHIEECSCYGERAEI----TCTCRDNWQGSNRPV-IRIDPVAM----------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5NN9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 430 -3101 -7.21 -31.32
target 2D structure prediction score : 0.34
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -7.21
2D Compatibility (Sec. Struct. Predict.) : 0.34
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.172

(partial model without unconserved sides chains):
PDB file : Tito_5NN9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5NN9-query.scw
PDB file : Tito_Scwrl_5NN9.pdb: