Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSFVPQIKIPATYMRGGTSKGVFFKLDDLPEKAQVAGQARDQLLLRVIGSPDPYGKQIDGMGGATSSTSKTVILAKSTQPDHDVDYLFGQVSIDQAFVDWSGNCGNLTAAVGSFAISNGLVDADRIPENGLCTVRIWQKNIQKTIIAHVPITNGQVQETGDFELDGVTFPAAEVQIEFLDPADDGEEGGDMFPTGNVVDQLDVPEIGSFQATFINAGIPTIFLNAEDLGYEGTELQDHINGDAAALARFEKIRAYGAVQMGLIKDISEAAA-RQHTPKIAFVSKPKNYTASSGKNVS-ENDVDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGG-EREAVRFGHPSGTLRVGAQAELTNGQWVVKKAIMSRSARVLMEGWVRIPGDSS
3G7K Chain:D ((2-378))---SDQMRIPCVIMRAGTSKGIFLKGNDLPAD----QELRDKVILRIFGSPDV--RQIDGLAGADPLTSKLAIIGPSTHPDADVDYTFAQVSITDAVVDYNGNCGNISAGVGPFAIDESFVKA----VEPMTRVCIHNTNTGKLLYAEVEVEDGKAKVSGDCKIDGVPGTNAPELMDFSDTAGA--ATGKVLPTGNVVDVLSTSK-GDIDVSIVDVANPCIFVHAKDVNMTGTETPDVINGNADLLAYLEEIRAKCCVKIGMAATEKEASEKSPAFPMIAFVTKPEDYVDFSTGNTISGDDVDLVSRLMFMQVLHKTYAGTATACTGSAARIPGTIVNQVLRDTGDEDTVRIGHPAGVIPVVSIVK----DGKVEKAALIRTARRIMEGYVYVEKAK-


General information:
TITO was launched using:
RESULT:

Template: 3G7K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 2232 -136665 -61.23 -365.41
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain D : 0.82

3D Compatibility (PKB) : -61.23
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_3G7K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3G7K-query.scw
PDB file : Tito_Scwrl_3G7K.pdb: