Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MQQALQQPQTLCIKHLAKNYSKRWVVKDVSFSMQSGQIVGLLGPNGAGKTTSFYMVVGLVRMDKGEIHLDDLDMSDRAMH-ERARKGIGYLPQEASIFRKLTIAENIMSILETRKDLNKQQRQQRLTELLNDFNISHIKDSLGMSVSGGERRRAEIARALAADPKFMLLDEPFAGVDPISVGDIKDIIQTLKDRGIGVLITDHNVRETLAICERAYIVSEGSVIAEGTPQEIL---DNEQVRKVYLGDDFTV 4YMW Chain:J ((2-234)) ----------IFVNDVYKNFGSLEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINNGKVNINKVRQKVGMVFQHFNLFPHLTAIENITLAPVKVKKMNKKEAEELAVDLLAKVGLLDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTRE---------

General information: TITO was launched using: RESULT: Template: 4YMW.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain J - contact count / total energy / energy per contact / energy per residue : 1174 -66048 -56.26 -288.42 target 2D structure prediction score : 0.55 Monomeric hydrophicity matching model chain J : 0.79 3D Compatibility (PKB) : -56.26 2D Compatibility (Sec. Struct. Predict.) : 0.55 1D Compatibility (Hydrophobicity) : 0.79 QMean score : 0.496

(partial model without unconserved sides chains): PDB file : Tito_4YMW.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4YMW-query.scw PDB file : Tito_Scwrl_4YMW.pdb: