Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKRLKVVIKDQFDQESIALAKVRPANDQKLELYKSVEHIEIDDDIILPNMDLLYENPKDGKIYKLVGPFNEDEL
4PDC Chain:F ((28-47))------------------------------------QIITFDGKDIRPTIPFMIGD------------------


General information:
TITO was launched using:
RESULT:

Template: 4PDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 32 -2974 -92.92 -148.68
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain F : 0.60

3D Compatibility (PKB) : -92.92
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.139

(partial model without unconserved sides chains):
PDB file : Tito_4PDC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PDC-query.scw
PDB file : Tito_Scwrl_4PDC.pdb: