Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFMTESRLTHLKQLEAESIHIIREVAAEFENPVMLYSIGKDSAVMLHLALKAFYPAKLPFPLLHVDTGWKFKDMIAFRDNMAKTHGF----DLIVHQNKEG--RE-----AGINPFDHGSSKYTDIMKTQALKQALDKYQFDAAFGGARRDEEKSRAKERVYSFRDSKHRWDPKNQRPELWNLYNGKVNKGESIRVFPLSNWTELDIWQYIYLENIQIVPLYFSAVRPVVERSGTLIMVDDERMRLKEGEVPQMKSVRFRTLGCYPLTGAVESEADTLPEIIQEMLLATSSERQGRMIDHD-EAGSMEKKKQEGYF
2OQ2 Chain:C ((29-256))----------------TPQEIIAWSIVTFPHLFQTTAFGLTGLVTIDMLSKLSEK-YYMPELLFIDTLHHFPQTLTLKNEIEKKYYQPKNQTIHVYKPDGCESEADFASKYGDFLWEKDDDKYDYLAKVEPAHRAYKELHISAVFTGRRKSQGSARSQLSIIEID-----------------------ELNGILKINPLINWTFEQVKQYIDANNVPYNELLDL---------------------------------GYRSIGDYHSTQPVKEG---------------EDERAGRWKGKAKTECGIHEASRFAQF


General information:
TITO was launched using:
RESULT:

Template: 2OQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1053 7596 7.21 35.16
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain C : 0.66

3D Compatibility (PKB) : 7.21
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.382

(partial model without unconserved sides chains):
PDB file : Tito_2OQ2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OQ2-query.scw
PDB file : Tito_Scwrl_2OQ2.pdb: