Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSILVIADHNNQTLNGATLNVVAAAQ--KIGGDITVLVAGSGAQAVADAAA-KVAGVSKVLLADNAAY---ANQLAENVAGLVADLAKGYKYVLAASTTTGKNILPRVAALLDVSMITDIISVESANTFKRPIYAG-NAIATVQSD---EAIIVGTVRGTAFDPVAAEGGSAAVETVGEVKDAGV-SKFVSEEIVKL---DRPELTAARIVVSGGRGVGSGENYHKVLDPLADKLGAAQGASRAAVDAGFVPNDFQVGQTGKIV-APELYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPINSVADYWLVGDLNAVVPELVSKL
3CLU Chain:D ((4-319))--ILVIAEHRRNDLRPVSLELIGAANGLKKSGEDKVVVAVIGSQADAFVPALSVNGVDELVVVKGSSIDFDPDVFEASVSALIA--AHNPSVVLLPHSVDSLGYASSLASKTGYGFATDVYIVEYQGDELVATRGGYNQKVNVEVDFPGKSTVVLTIRPSVFKPL--EGAGSPV--VSNVDAPSVQSRSQNKDYVEVGGGNDIDITTVDFIMSIGRGIGEETNVEQFRE-LADEAGATLCCSKPIADAGWLPKSRQVGQSGKVVGSCKLYVAMGISGSIQHMAGMKHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQL


General information:
TITO was launched using:
RESULT:

Template: 3CLU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1665 -6541 -3.93 -21.73
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain D : 0.80

3D Compatibility (PKB) : -3.93
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3CLU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3CLU-query.scw
PDB file : Tito_Scwrl_3CLU.pdb: