Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------MKNKNIGCWLLLAGSSSVCAMQPLDDQSLAAATGQN---GLTLGIQADQ----------VKFN----QVALIDTNG--------IASTSYNSKAGLIIAGNSTNPVPGI-------EFIKAAVSTN-PSFNIAI---DTDAGGGNPFLNLAVTMGSDVNGIRLLPFSVYLAPSTSLPSPSDYALTSYAP-----KSIFSSGTTVNTGVKELI-------RSTGN---LDINFVQT-----NKPRLNIQLGHAAQSVMVKFG--GAIQSICSAASGCPITLVSDNTGATFGFKFAGTNAST----GFVLDG----------FYAGVD------------PTGLTIGNIGVSSKFDASLNNVTLGNLGTQSTTTFNNLPNGSMGSFGVTGASVTDFKMKVSGF----------------------------
1F60 Chain:A ((2-441))GKEKSHINVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKYQVTVIDAPGHRDFIKNMITGTSQADCAILIIAGGVGEFEAGISKDGQTREHALLAFTLGVRQLIVAVNKMDSVKWDESRFQEIVKETSNFIKKVGYNPKTVPFVPISGWNGDNMIEATTNAPWYKGWEKETKAGVVKGKTLLEAIDAIEQPSRPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVIKPGMVVTFAPAGVTTEVKSVEMH-HEQLEQGVPGDNVGFNVKNVSVKEIRRGNVCGDAKNDPPKGCASFNATVIVLNHPGQISAGYSPVLDCHTAHIACRFDELLEKNDRRS-GKKLEDHPKFLKSGDAALVKFVPSK----PMCVEAFSEYPPLGRFAVRDMRQTVAVGVIKSVDK


General information:
TITO was launched using:
RESULT:

Template: 1F60.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1506 9571 6.36 30.77
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 6.36
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.198

(partial model without unconserved sides chains):
PDB file : Tito_1F60.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F60-query.scw
PDB file : Tito_Scwrl_1F60.pdb: