Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MYLKLLLYRLNESGHPIEFEKANLPQGLSAEIADSFRGWGIELSGKIAKSTAF---------------------------------------------------------------------------------------------------------------------------------------------
4XFK Chain:A ((9-399))AEPLKIALVETLSGPQASTGLLYRAAVLYQLGKINEAGGFNGEKIQILEYDNQGGPVGAADRVKAAIADGAQIIVQGSSSAVAGQITEDVRKYNLRNKGKEVLYLNLGAEALELTGSKCHFYHFRFSPNAAIRFKTVAQGMKDKGILGERAYSINQNYSWGVDVENTVVANAKEIGYEVVDKTLHEVNKIQDFSPYVAKIQAANVDTVFTGNWSNDLLLLMKAASGAG-------------LKAKFATSF----LDQPGNIGNAGAIAEGHIVSTPFNPEANGEASMAFAEDYKKVTGHYPSYVEPAAVFGLQLFGEALKNVKPGEGKINTTDIALAIENASVKTPMGDYSMRSDDHQAKFPMVVQEVSKKARIKADGTEYGFLPFKTFTGDESIDPVQESCSMKRPG


General information:
TITO was launched using:
RESULT:

Template: 4XFK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 43 -232 -5.40 -6.44
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -5.40
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.297

(partial model without unconserved sides chains):
PDB file : Tito_4XFK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XFK-query.scw
PDB file : Tito_Scwrl_4XFK.pdb: