Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNQEIVVIL----GN-------ADKRDWHFILVQ------------LFFQLLGRRDRLFKTYFR------FNKIQDNPFRIMNLMLLIFIV---------LWLGYINHDFLISSFSSLGIFTFFYYQ-----------NIPMKYLLKRMFLIGCGLLVAFVLG----ILSTYVLWLEPFAVALVAFSSRFVLRLFHISKPGGLFFAMLSAMGTSMQLPIAQLPIVSLYFFM------GVVFALIAAVITK------LLDSRPEQTIEKATLKERFHEEP--LVIID------------SVFYSAA--LFLSVYVSHGLNLH----NPYWLTLSCASILLAE-------NLDAMKHRQVQY-----------LIGSMGGLCVSAFLSFVPFTQLQT---------IFLITFL------YGIAQFLVARNYAVANIFLNPMALMLSTLIRGAYLISLIEY--------RFLGIVIGSFIGLGVAWVMTVGLQHYLTVVRQKLE------------------------------------
1JVN Chain:A ((1-555))GSHMPVVHVIDVESGNLQSLTNAIEHLGYEVQLVKSPKDFNISGTSRLILPGVGNYGHFVDNLFNRGFEKPIREYIESGKPIMGIVGLQALFAGSVESPKSTGLNYIDFKLSRFDDSEKPVPEIGWNSCIPSENLFFGLDPYKRYYFVHSFAAILNSEKKKNLENDGWKIAKAKYGSEEFIAAVNK--NNIFATQFHPEKSGKAGLNVIENFLKQQSPPIPNYSAEEKELLMNDYSNYGLTRRIIACLDVRTNDQGDLVVTKGDLGKPVQLAQKYYQQGADEVTFLNITDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCWYQCTIKGGRESRDLGVWELTRACEALGAGEILLNCIDKDGSNSGYDLELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKEYLLEHGLKVRMDEE


General information:
TITO was launched using:
RESULT:

Template: 1JVN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1988 -122420 -61.58 -327.33
target 2D structure prediction score : 0.37
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : -61.58
2D Compatibility (Sec. Struct. Predict.) : 0.37
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.230

(partial model without unconserved sides chains):
PDB file : Tito_1JVN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1JVN-query.scw
PDB file : Tito_Scwrl_1JVN.pdb: