Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceML----------PFFIYWGVILACIA------WLALSVYFSVFYLVRKEN----GNL-WAFALFNVI-----AAIVLAITLAVYR---TWGWGITQYSSLIYLILAIYGVVVLLQAILGREPKKAAA----------
2JOZ Chain:A ((1-135))MIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTLKRG--ENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKSLEHHHHHH


General information:
TITO was launched using:
RESULT:

Template: 2JOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 269 -10088 -37.50 -105.08
target 2D structure prediction score : 0.11
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -37.50
2D Compatibility (Sec. Struct. Predict.) : 0.11
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.183

(partial model without unconserved sides chains):
PDB file : Tito_2JOZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JOZ-query.scw
PDB file : Tito_Scwrl_2JOZ.pdb: