Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEKTFQRIKELTELQGTSGFEQDVRAYMESHMEPLVDELQLDGLGGIFGLRHHEEADAPRVMVAAHMDEVGFMLTQIQENGLFKVVPLGGWNPYVVSAQRFTLKTSTGKNYPCISSSVPPHLLRGTSGQKSVEVTDILFDAGFESREEAMSYGVLPGDTIVPYAETIKTANGKNIISKSWDNRYGCTMVLEALEALQNETLGHTLIAGANVQEEVGLRGSKASVNKFKPDLFFAVDCSAADDT---VTKNGTFGHLGEGTLMRIQDPGLIMLPRLREYLLDIAETNNIPYQYFV-SKGGTDAGAAHTQNEGIPSTVIGVVGRYIHTHQTMFSIRDFEAAREMLIQTLKGLDKSTVNTIVYGK
5L6Z Chain:A ((5-329))--------IRKLTEAFGPSGREEEVRSIILEELEGHIDGHRIDGLGNLIVWKGSGEK---KVILDAHIAEIGVVVTNVDDKGFLTIEPVGGVSPYMLLGKRIRFENGTIGVVGMEGETTEER----QENVRKLSFDKLFIDIGANSREEAQK--MCPIGSFGVYDSGFVEVSGK-YVSKAMDDRIGCAVIVEVFKRIKPAV---TLYGVFSVQEEVG--------YGVPADEAIAIDVTDSADTPKAIKRHAM--RLSGGPALKVKDRASISSKRILENLIEIAEKFDIKYQMEVLTFG-------------IPSATVSIPTRYVHSPSEMIAPDDVEATVDLLIRYL---------------


General information:
TITO was launched using:
RESULT:

Template: 5L6Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1663 -149764 -90.06 -499.21
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -90.06
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_5L6Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L6Z-query.scw
PDB file : Tito_Scwrl_5L6Z.pdb: