Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDKPVDVVHNCWGNLFNKNSQNKHIDE-----KIDYNKQSEHEDQRRENMNIKII--SVGKLKEKYLIQGINEYVKRLNAYAKIELIEVP--DEKAPE-----------NLSEAQ--MRQVKEKEGERILAKIKEQEYVYA-LAIEGKNPTSESFAKQIDQLGIQGKSHLVFVIGGSLGLSEAVMKRSNAQISFGKM-TYPHQLMRLI-LVEQIYRAFRINAGAPYHK------------------------------------------------------------------
4DO7 Chain:A ((3-289))-ALRIDSHQHFWRY---RAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDEADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDA------HWLVLDHAGKPALAEFDTALARWRAALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAESRLSAAERSALWGGTAARCYALP


General information:
TITO was launched using:
RESULT:

Template: 4DO7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 822 -3138 -3.82 -16.26
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : -3.82
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.235

(partial model without unconserved sides chains):
PDB file : Tito_4DO7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DO7-query.scw
PDB file : Tito_Scwrl_4DO7.pdb: