Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANEETVGLRIIEEAFKLPMVKVDRRAFLIQTFQGKVSDIEGLIEKGPQAFLSKEMLDREAQKCIQSITLKSSAVSLATGLPGGIAMAATIPADLLQFFGYSLRLAQEISYIYGFKDLMGENGELSEEAKNTLILYLGIMLGVTSAGSAVRAMSGKLSTQALKKIPQKALTQTLYYPVIKRVLGIFGTKLTKNTFAKGISKAVPVVGGVVSGGINYLSMKPMATKLQTELGKNVAYTEESLQQDLDILEGEFEEVSSDIASSDTVLSQLERLSHLLETNMITEEEFQQLKQELLKK
4YLF Chain:A ((108-161))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVGGGVGIATLYPIAKALK-EAGNNITTVLGARTKDYLIMVDEFKEISDVLLVTD---------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 171 -6036 -35.30 -111.77
target 2D structure prediction score : 0.22
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : -35.30
2D Compatibility (Sec. Struct. Predict.) : 0.22
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.326

(partial model without unconserved sides chains):
PDB file : Tito_4YLF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YLF-query.scw
PDB file : Tito_Scwrl_4YLF.pdb: