Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQTLVTKGDLNELFRSHLEKAINTLLRTELTAFLDYEKYDRTGFNSGNSRNGSYFRSIKTEYGELTLEIPRDRNGEFKQQTLPAYKRTNDTLETTIIHLFEKGVTMSEIADLIEKMYGHHYTPQTMSNMTKVLTEEVNAFKSRALNDKYVAIFMDATYIPLKRQTVSKEAIYIAIGIREDGTKEVLSYAIAPTESTYVWNELLQDINSRGVQEVLLFITDGLKGMKDTIHQIYPKAKYQHCCIHVSRNIAHKVRV----KDRKEICDDFKAVYQANSKEEANTFLSGMIEKWKKNYPKVTQSLIENQDLLTFYDFPPSIRRTIYSTNLIESFNKQIKRYSRRKEQFQNEESLERFLVSIFDTYNQKFLNRSHKGFQQVTDTLVSMFTE
3P1B Chain:A ((11-115))-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HQLYEMYLQDEDAFHSKRDYPHKKVFTELQKLRKIFFPDFFMKHQKITESHIASELTKLVDYIKDSVTAYNDELFAHQCVMAILEKLPSIKRTL-KTDLIAAY--------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3P1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 268 -14049 -52.42 -143.36
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -52.42
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.211

(partial model without unconserved sides chains):
PDB file : Tito_3P1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3P1B-query.scw
PDB file : Tito_Scwrl_3P1B.pdb: