Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSYRKLGRTSSQRKAMLRDLTTDLLINERIVTTEARAKEVRSTAEKMITLGKRGDLHARRQAAAFVRNEVASVREENEDIVIESALQKLFNDIAPRYAERQGGYTRILKTEPRRGDGAPMVVLELV
5MMI Chain:O ((19-126))----RLSRPADQRRALLRGLTTQLLKHGRIKTTRAKASAMRKYVDKMITLAKEGSLHKRRQALGFI----------YEKQIVHA----LFAEVPERYGDRNGGYTRIIRTLPRRGDNAPMAYIELV


General information:
TITO was launched using:
RESULT:

Template: 5MMI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 372 -46074 -123.85 -426.61
target 2D structure prediction score : 0.76
Monomeric hydrophicity matching model chain O : 0.85

3D Compatibility (PKB) : -123.85
2D Compatibility (Sec. Struct. Predict.) : 0.76
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.729

(partial model without unconserved sides chains):
PDB file : Tito_5MMI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5MMI-query.scw
PDB file : Tito_Scwrl_5MMI.pdb: