Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITKPDKNKTRQKRHRRVRNNISGTAERPRLNVFRSNKNIYAQIIDDVAGVTLASASTLDKEIS------GGTKTEAAQAVGKLVAERAAEKGIKVVVFDRGGYLYHGRVQALAEAARENGLEF
5X8T Chain:P ((53-166))----------RTARHVRIRKKVEGTPERPRLCVFRSNKHLYVQVIDDTKMHTLAAASTMQKAISENIDYSAGPTVEVAQKIGEMIAKSCLEKGITKVAFDRGGYPYHGRVKALADAAREHGLVF


General information:
TITO was launched using:
RESULT:

Template: 5X8T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 461 14983 32.50 138.73
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain P : 0.85

3D Compatibility (PKB) : 32.50
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.85
QMean score : 0.566

(partial model without unconserved sides chains):
PDB file : Tito_5X8T.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5X8T-query.scw
PDB file : Tito_Scwrl_5X8T.pdb: