Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMMAELKKMQDYEYDLPELVDQPEQQMPDSSSNQEIILPQSPAKRLKQISALEKIAVASVAIAIVALCVLTVMLRTNISGAEKEITSIQTEINDKKQEKTSLEQEKNELSRTERIKQIAEEKGLSINDDNLRKVK
5U5A Chain:A ((2-29))----------------------------------------------------------------------------------EIAALK-ENAALKEEIAALKKEIAALK-------------------------


General information:
TITO was launched using:
RESULT:

Template: 5U5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2 -160 -79.75 -6.13
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.58

3D Compatibility (PKB) : -79.75
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.58
QMean score : 0.914

(partial model without unconserved sides chains):
PDB file : Tito_5U5A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5U5A-query.scw
PDB file : Tito_Scwrl_5U5A.pdb: