Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKL-CDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISVSQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQGKDLQQVLADLKTLLT-DNGFVVDYVEARQPNLLAASQFDRDIVLFVAAKLGGTRLIDNLQVAFTPQ
3IVC Chain:A ((11-288))LNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPD-GLRTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQ--AALDAARAVLDAAPGVAVDYLELRDIGL-GPMPLNGSGRLLVAARLGTTRLLDNIAIEIG--


General information:
TITO was launched using:
RESULT:

Template: 3IVC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1435 -97263 -67.78 -352.40
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : -67.78
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.571

(partial model without unconserved sides chains):
PDB file : Tito_3IVC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3IVC-query.scw
PDB file : Tito_Scwrl_3IVC.pdb: