Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGHSVALNFADGKTFFISVNKDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQEYVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETQVTAVELVSETTAILHLDASNHAEQLQFLPGQYARLQIPDT--EDWRSYSFANRPNATNQLQFLIRLLPDGVMSNYLRDRCQVGQSLLIEAPLGSFYLRE---VERPLVFVAGGTGLSAFLGMLDNLVEQPNSPTVQFYYGVNSETDLCEQQRLHAYAEQLPNFSYHPIVTKATETWQGKAG-YIHEHLNK-----D---QLAEQAFDMYLCGPPPMIEAVKNWLDEQALQ------NYRIYSEKFLQSNTSR
5UFA Chain:A ((16-267))--------------------------------------------------------------------------------------------------------KFTEEKILWVKHHTPKLITFAISRP---ESYRFKAGQFSRLGFYEGKGFIWRAYSVVSAEYA-DTLEYFAVLIQDGPMSALFAK-MQQGDTILLDKNATGFLLPERFPDGKDLVMLCTGSGIAPFLSILEQPEIRQRFDTVNLIHSVSFPEELIFNDRLAALSEH--SFRFVPVTTRAANP-SGLSGKRIPELLKNNSIEQALHTKLTPESTRFMICGNPEMVKDTFQTLLDMGYAMHRNRIPGQIMMENGF------


General information:
TITO was launched using:
RESULT:

Template: 5UFA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1183 -8406 -7.11 -37.53
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -7.11
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.410

(partial model without unconserved sides chains):
PDB file : Tito_5UFA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UFA-query.scw
PDB file : Tito_Scwrl_5UFA.pdb: