Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTQTSLSQSPNDTTSSQDVIEIKTVTRSVGRKATITKEELFQAALNLIGPQKSIASLSLREVAREAGIAPNSFYRHFKDIDELAISLIDRAGIVLRKIIRQARLRASLQDSIIRSSVEIFLQQLDADEGNLSLFLREGFTGSASYKAAVDRQLNFFQQELQEDLIRLERLNNNHLYHPELVAKAITQLVFHMGAKVIDLPIDQRAEVAEQTMIMIRMILEGARHLDEAKIR
3HIM Chain:A ((14-203))--------------------------------TSKAAARIRAAAIEVFA-AKGYGATTTREIAASLDMSPGAVYPHYKTKESLLYAISLEGHHSVLAAITAADFPDIAAPDRLMSTVTAYVTWHADNRASARVGQYELRSLSPEHFAIIADIRRSTTKVFTRIIEAGATAGDFHPFDIEAAALAITSLGID-VSRWFPSHT--YSDPRIIAARYVELALRMVGCAD-----


General information:
TITO was launched using:
RESULT:

Template: 3HIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 805 -105535 -131.10 -555.44
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -131.10
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.483

(partial model without unconserved sides chains):
PDB file : Tito_3HIM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HIM-query.scw
PDB file : Tito_Scwrl_3HIM.pdb: