Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGFLVSLEGPEGAGKTSVLEALLPILEEKGVEVLTTREPGGVLIGEKIREVILDPSHTQMDAKTELLLYIASRRQHLVEKVLPALEAGKLVIMDRFIDSSVAYQGFGRGLDIEAIDWLNQFATDGLKPDLTLYFDIEVEEGLARIAANSDREVNRLDLEGLDLHKKVRQGYLSLLDKEGNRIVKIDASLPLEQVVETTNAVLFDGMGLAK
3HJN Chain:A ((1-192))----MFITFEGIDGSGKSTQIQLLAQYLEKRGKKVILKREPGGTETGEKIRKILLEEE---VTPKAELFLFLASRN-LLVTEIKQYLSEGYAVLLDRYTDSSVAYQGFGRNLGKEIVEELNDFATDGLIPDLTFYIDVDVETALKRK---N-RF----E--KREFLERVREGYLVLAREHPERIVVLDGKRSIEEIHRDVVREVKRR-----


General information:
TITO was launched using:
RESULT:

Template: 3HJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 943 -73878 -78.34 -390.89
target 2D structure prediction score : 0.81
Monomeric hydrophicity matching model chain A : 0.79

3D Compatibility (PKB) : -78.34
2D Compatibility (Sec. Struct. Predict.) : 0.81
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.667

(partial model without unconserved sides chains):
PDB file : Tito_3HJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HJN-query.scw
PDB file : Tito_Scwrl_3HJN.pdb: