Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKALPIAVAVVLGGAALVPVYYATQHPTTEVGHKADKNASPIQKISYVLGYEVAQQTPP----------ELDTKAFVQGIHDVRNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADAQFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSIVKVHYEGRLINGQVFDSSYKRGQPVEFPLNQVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQELPGIPANSTLIFDVELISVK
1Q6I Chain:A ((15-224))-------------------------------------AFKNDDQKSAYALGASLGRYMENSLKEQEKLGIKLDKDQLIAGVQDAFADK-SKLSDQEIEQTLQAFEARVKSSAQAKMEK--DAADNEAKGKEYREKFAKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRLDGVIPGWTEGLKNIKKGGKIKLVIPPELAYGKAGVPGIPPNSTLVFDVELLDVK


General information:
TITO was launched using:
RESULT:

Template: 1Q6I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 631 62454 98.98 312.27
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 98.98
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.579

(partial model without unconserved sides chains):
PDB file : Tito_1Q6I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Q6I-query.scw
PDB file : Tito_Scwrl_1Q6I.pdb: