Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKLNFKSEQDFFILFEQLKALFPNASLFLADTSTQAIHYKFNTDDISVESMTALTQDHHNRYLEINTPKMRKRFIYQENDIYIAEHRIIGKLHILQPVSIENDIADQVELTEQLQDLAKVFNSCSPEMTRMFSIIQRVAIAEFPVLVRGESGSGKELVAQAIHDYSQRKNKIFVAINCAALNSNILESELFGHVKGAFTGAIRDHKGVFERAAGGTLFLDEIAEIPLELQAKLLRVLETGEFTPVGGEKPIQANVRIITATHKALREEAKAGRFRHDLLYRLRVIPIFIPPLRERKVDIPLIVDQILKESSTQLDTMPRHVNQKAMQVLLNYDWPGNVRELKNTLLYALTMANGKDEIEVEDLPNELLDAD--EYVKLPENNAELTPENVQAALEKYNHNLNMVANIFGISRTTLWRYRQKHKL
1OJL Chain:D ((3-304))------------------------------------------------------------------------------------------------------------------------HMIGSSPAMQHLLNEIAMVAPSDATVLIHGDSGTGKELVARALHACSARSDRPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDISPLMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAEEVSAGRFRQDLYYRLNVVAIEMPSLRQRREDIPLLADHFLRRFAERNRKVVKGFTPQAMDLLIHYDWPGNIRELENAIERAVVLLTGEY-ISERELPLAIAATPIK----EIQPLVDVEKEVILAALEKTGGNKTEAARQLGITRKTLLAKLSR---


General information:
TITO was launched using:
RESULT:

Template: 1OJL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 1317 -120458 -91.46 -408.33
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain D : 0.73

3D Compatibility (PKB) : -91.46
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.494

(partial model without unconserved sides chains):
PDB file : Tito_1OJL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1OJL-query.scw
PDB file : Tito_Scwrl_1OJL.pdb: