Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNNERIYQVLKGLVFSEKAQVLGDTAGVQVFKVDINATKLEIKKAVEKLFGVEVVKVNTTITKGKTKRFGRTLGRRSDVKKAYVTLKAGQDV-EMADLGDTAESAAE
3J79 Chain:Y ((103-185))-KTLDKYGLIKYPLTSEKAMKKIEEINTLVFMCDKRANKKNIKKSVKNLFGIECDKVNVLNTLN-------------GDKKAYVRLSGEHDALEVAN----------


General information:
TITO was launched using:
RESULT:

Template: 3J79.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain Y - contact count / total energy / energy per contact / energy per residue : 355 -29989 -84.47 -365.71
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain Y : 0.68

3D Compatibility (PKB) : -84.47
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.640

(partial model without unconserved sides chains):
PDB file : Tito_3J79.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3J79-query.scw
PDB file : Tito_Scwrl_3J79.pdb: