Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRIILLGPPGAGKGTQAQLICKRYNIPQISTGDMLRAAIREGTELGLKAKSVMESGGLVSDELIIGLVKERIAQPD-CVNGCIFDGFPRTIPQAEALEKEGI----SIDHVIEIDVPDEEIVKRLSGRRQHPASGRVYHVVYNPPKVEGKDDETGEDLVQRPDDQEETIRKRLASYHTETEQLVGFYQGRAASGENAPTYDKLDGLRTIEDVQKDLFNILDK 1AKY Chain:A ((5-218)) IRMVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEAKKIMDQGGLVSDDIMVNMIKDELTNNPACKNGFILDGFPRTIPQAEKLDQMLKEQGTPLEKAIELKVDDELLVARITGRLIHPASGRSYHKIFNPPKEDMKDDVTGEALVQRSDDNADALKKRLAAYHAQTEPIVDFYKKTGIW-------AGVDASQPPATVWADILNKLG-

General information: TITO was launched using: RESULT: Template: 1AKY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 942 4874 5.17 23.32 target 2D structure prediction score : 0.76 Monomeric hydrophicity matching model chain A : 0.85 3D Compatibility (PKB) : 5.17 2D Compatibility (Sec. Struct. Predict.) : 0.76 1D Compatibility (Hydrophobicity) : 0.85 QMean score : 0.538

(partial model without unconserved sides chains): PDB file : Tito_1AKY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-1AKY-query.scw PDB file : Tito_Scwrl_1AKY.pdb: