Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTT-FRLEPGERLAQYVLVPVVQAEFEQVEEFEETLRGAGGFGHTGKQ
1SJN Chain:C ((9-133))----------RLDPGLPLPSRAHDGDAGVDLYSA--EDVELAPGRRALVRTGVAVAV-PFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALINLDPAAPIVVHRGDRIAQLLVQRVELVELVEVSSFDEA-------------


General information:
TITO was launched using:
RESULT:

Template: 1SJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 525 -59478 -113.29 -479.66
target 2D structure prediction score : 0.48
Monomeric hydrophicity matching model chain C : 0.75

3D Compatibility (PKB) : -113.29
2D Compatibility (Sec. Struct. Predict.) : 0.48
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_1SJN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SJN-query.scw
PDB file : Tito_Scwrl_1SJN.pdb: