Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLLLVFHPDLS--QSKVNRALVATLKDQ-DKIDIVDIQKLY-NGSL----------------------------DIMNDGAIEAQRLISASHIILQFPIYWYSVPPIFKAWMDAVLTRMFYLFYE--QEGQHIEGKPLYLHITVGNLSSAYQKLGQNGFTLDELMAP-LKATARRCGLIWHPPHVIFNANQLNENDITEQTSLSLKQFEQWGIFNNNSFILVLSQKKRTSEKSEVRTML
1D4A Chain:C ((2-195))GRRALIVLAHSERTSFNYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLVIFQFPLQWFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGGSGSMYSLQGIH-GDMNVILWPIQSGILHFCGFQVLEPQLTYSIGHT-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1D4A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 635 -47435 -74.70 -298.33
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -74.70
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.510

(partial model without unconserved sides chains):
PDB file : Tito_1D4A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1D4A-query.scw
PDB file : Tito_Scwrl_1D4A.pdb: