Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMITMDDIIREGNPTLREVAKEVSLPLSEEDISLGKEMLEFLKNSQDPIKAEELHLRGGVGLAAPQLDISKRIIAVHVPSPDPEADGPSLSTVMYNPKILSHSVQDACLGEGEGCLSVDRE-VPGYVVRHAKITVSYYDMNGEKHKIRLKNYESIVVQHEIDHINGVMFYDHINDQNPFALKEGVLVIE
2OKL Chain:B ((2-179))MLTMKDVIREGDPILRNVAEEVSLPASEEDTTTLKEMIEFVINSQDPEMAEKYSLRPGIGLAAPQIGVSKKMIAVHVTDADG----TLYSHALFNPKIISHSVERTYLQGGEGCLSVD-REVPGYVPRYTRITVKATSINGEEVKLRLKGLPAIVFQHEIDHLNGVMFYDHINKENPFAAPDD-----


General information:
TITO was launched using:
RESULT:

Template: 2OKL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 900 -45087 -50.10 -254.73
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.88

3D Compatibility (PKB) : -50.10
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.556

(partial model without unconserved sides chains):
PDB file : Tito_2OKL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKL-query.scw
PDB file : Tito_Scwrl_2OKL.pdb: