Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEAYIIDAIRTPRGKGKKDGSLYEVKPITLLTTLLNELQQRHQLDTSKVDDIVLGCVTPIGDQGGDIAKTAAIAAGWNDDVAGVQINRFCASGLEAVNMAAMKVRSGWEDLVVAGGVESMSRIPMGSDGG--PWALDPETNLKSSFVPQGVGADLIATLDGYSREDVDNFAVKSQQKAAAAQANGYFDQSVVPVKDHAG--------VVILEKDEFIKGNTTLEGLAKLNPSFEMMGQMGFDAIALQKYPEAQKVNHVHHAGNSSGIVDGAALVLLASEKAVKEQNLKPRAKVLATALVGTDPTIMLTGPAPAARKALEKAGLTIDDIDLFEVNEAFAAVVMRFINELNVPAEKVNVNGGAIALGHPLGATGAMILGTLLDELERQN--KKRGLATLCVGGGMGIATIIERV
2WU9 Chain:B ((29-418))GDDVVIVAAHRTPLCKSKRG-NFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKF-AQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLGKLKPVFKKD---GT-----------------TTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRGKDCRFGVVSMCIGTGMGAAAVFER-


General information:
TITO was launched using:
RESULT:

Template: 2WU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2426 -45169 -18.62 -119.49
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -18.62
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.459

(partial model without unconserved sides chains):
PDB file : Tito_2WU9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2WU9-query.scw
PDB file : Tito_Scwrl_2WU9.pdb: