Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRKPIIAGNWKMNKTASEAKEFAEAVKNKIPSNDKVDSVIGSPALFL---QELMTSAEGTELKISAQNCYWENSGAFTGETSPAALADLGVHYVIIGHSERREYFHETDEDINKKAKAIFANGMTPILCCGESLETYEAGKTAEWIEGQITAGLADLSAEQVSNMVIAYEPIWAIGTGKSADAQIADEICGVVRQTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENVDGALVGGASLQADSFLSLLDAVK
4YXG Chain:A ((3-246))-RKYFVAANWKCNGTLESIKSLTNSFNNLDFDPSKLDVVVFPVSVHYDHTRKLLQSKFSTGI----QNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHYERRKYFHETDEDVREKLQASLKNNLKAVVCFGESLEQREQNKTIEVITKQVKA-FVDL-IDNFDNVILVYEPLW--------TPEQAQLVHKEIRKIVKDTCGEKQANQIRILYGGSVNTENCSSLIQQEDIDGFLVGNASLK-ESFVDIIKS--


General information:
TITO was launched using:
RESULT:

Template: 4YXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1216 -2461 -2.02 -10.56
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -2.02
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.482

(partial model without unconserved sides chains):
PDB file : Tito_4YXG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YXG-query.scw
PDB file : Tito_Scwrl_4YXG.pdb: