Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLLLVFHPD----LS-QS-KVNRALVATLKDQ-DKIDIVDIQKLYNGSLDIMNDGAIEAQRLISASHIILQFPIYWYSVPPIFKAWMDAVLTRMFYLFYEQ----------EGQHIEGKPLYLHITVGNLSSAYQKLG--QNGFTLDELMAPLKATARRCGLIWHPPHVIFNANQLNENDITEQTSLSLKQFEQWGIFNNNSFILVLSQKKRTSEKSEVRTML
4S24 Chain:A ((4-177))MSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQVKITTVDQ--------GYDIESEIENYLWADTIIYQMPAWWMGEPWILKKYIDEVFTDGHGRLYQSDGRTATKGYGSGGLIQGKTYMLSVTWNAPREAFTDPEQFFHGVGVDGVYLPFHKANQFLGMKPLPTFMCNDVIKQ-----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4S24.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 603 -30673 -50.87 -201.79
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -50.87
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.573

(partial model without unconserved sides chains):
PDB file : Tito_4S24.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4S24-query.scw
PDB file : Tito_Scwrl_4S24.pdb: