Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMALSALRKRVAYFYDPDIGSYYYGPGHPMKPQRIRMAHALVLSYDLYKHMEVYRPHKSIEPELCLFHSSDYISFLSSVSPENYKEFSLQLKNFNVGEATDCPVFDGLFTFQQACAGASIDAAKKLNHHQADICVNWSGGLHHAKRSEASGFCYINDIVLG--ILELLKYHARVMYIDIDIHHGDGVEEAFYVSHRVMTVSFHKF--GDFFPGTGDVTDVGASQGKYYAVNVPLNDGMD----DDSFVALFKPVITKCVDVYRPGAIVLQCGADSLTG--DRLGKFNLTIKGHAACVAFVKSLDIPLLVLGGGGYTIRNVARCWAYETGVVLDRHREMSPHVPLNDYYDYYAPDFQLHLTPSSIPNSNSPEHLEKIKTRVLSNLSYLEHAPGVQFAYVPPDFFGEDNDDEDEFMQNQVDNEGGGRAAGATAHTAANAPYRIRRKDYANDFEDMADRDQKVPI
4CBT Chain:C ((158-328))--------------------------------------------------------------------------------------------------------------------------------------------HHAEESTPMGFCYFNSVAVAAKLLQQRL--SKILIVDWDVHHGNGTQQAFYSDPSVLYMSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIASEFAPDVVLVSSGFDAVEGHPTPLGGYNLS----ARCFGY---LTKQLMGLAGG-----------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4CBT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 770 -31414 -40.80 -205.32
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain C : 0.63

3D Compatibility (PKB) : -40.80
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.355

(partial model without unconserved sides chains):
PDB file : Tito_4CBT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CBT-query.scw
PDB file : Tito_Scwrl_4CBT.pdb: