Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQ-MVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
5SZD Chain:C ((8-72))------LQESFLNTARKKRVKVSVYLVNGVRLQGRIRSFDLFTILLEDGKQQTLVYKHAITTIVPHERLE-I--------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5SZD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 233 -37825 -162.34 -591.01
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain C : 0.70

3D Compatibility (PKB) : -162.34
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.526

(partial model without unconserved sides chains):
PDB file : Tito_5SZD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5SZD-query.scw
PDB file : Tito_Scwrl_5SZD.pdb: