Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKALPIAVAVVLGGAALVPVYYATQHPTTEVGHKADKNASPIQKISYVLGYEVAQQTPPELDTKAFVQGIHDVRNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADAQFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSIVKVHYEGRLINGQVFDSSYKRGQPVEFPLNQVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQELP-GIPANSTLIFDVELISVK
5XB0 Chain:A ((5-132))--------------------------------------------------------------------------------------------------------------PTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQST---QPQWFRLDSVISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAVS


General information:
TITO was launched using:
RESULT:

Template: 5XB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 603 -32767 -54.34 -258.00
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -54.34
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_5XB0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5XB0-query.scw
PDB file : Tito_Scwrl_5XB0.pdb: