Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSAQSKVLITGASSGIGSVYADRFAQRGYHLILVARDTNRLDKISKDLQEKYGLQVEFIQADLSNDQDIRKIE-DVLKNDADIEILVNNAGIALNGNFLTQDRNEIEKLLTLNITAVVRLSHAMSQSLIRKGKGAIINLGSVLGLAPEFGSTIYGASKSFIQFFSQGLHLELKDH--GVHVQAVLPSATKTEIWERSGIDLSQVP-PLMDVNDLVDAALIGFDRKETITIPVLKDENQWNNFEKSRMTLLPNFSSAEVAQRYKN
1XU9 Chain:B ((26-248))-LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQ-SNGSIVVVSSLAGKVAYPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAVSG--IVHMQAAPKEECALEIIKGGALRQE-------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1XU9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1170 -87589 -74.86 -399.95
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -74.86
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.470

(partial model without unconserved sides chains):
PDB file : Tito_1XU9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XU9-query.scw
PDB file : Tito_Scwrl_1XU9.pdb: