Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAEKILVEHLVKKYGDN--TVLNDINVSINEGDVVCIIGPSGSGKSTFLRCLNRLEEPSDGEIIIDG-------------AHLMDKSTDINLVRQHIGMVFQHFNLFPHLSILENIILAPMDLKK-ESREEAEKKAIKLLQ----------TVGLEDKKDMYPEMLSGGQKQRVAIARALAM-NPDIMLFDEPTSALDPEMVGDVLNVMKKLAEQGMTMVIVTHEMGFAKEVANRVMFI-DDGNFLEDGTPQQIFENPQN--ERTKDFLNKVLNI-
1B0U Chain:A ((5-261))--NKLHVIDLHKRYGG-HEVLK-GVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRT-R-LTMVFQHFNLWSHMTVLENVMEAPIQVL-GLSKHDARERALKYLAKVGIDERAQG---------KYPVHLSGGQQQRVSIARALAME-PDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLH-QGKIEEEGDPEQVFGNP-QSPRLQQFLKGSLKKLE


General information:
TITO was launched using:
RESULT:

Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1162 46073 39.65 203.86
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.84

3D Compatibility (PKB) : 39.65
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.84
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_1B0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B0U-query.scw
PDB file : Tito_Scwrl_1B0U.pdb: