Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMILKIEDLVMSIISTDLTPFQIDDTLKAALREDVHSEDYSTNAIFDHHGQAKVSLFAKEAGVLAGLTVFQRVFTLFDAEVTFQNPHQFKDGDRLTSGDLVLEIIGSVRSLLTCERVALNFLQHLSGIASMTAAYVEALGDDCIKVFDTRKTTPNLRLFEKYAVRVGGGYNHRFNLSDAIMLKDNHIAAVGSVQKAIAQARAYAPFVKMVEVEVESLAAAEEAAAAGADIIMLDNMSLEQIEQAITLIAGRSRIECSGNIDMTTISRFRGLAIDYVSSGSLTHSAKSLDFSMKGLTYLDV
3TQV Chain:B ((14-286))----------------VPNDIVTRLVRESLAEDIATGDITAQLA--EDIDTTAFCITREEMILCGQDFANEVINQLDKNIQI--TWLYSDAQKVPANARIFELKGNVRSILTAERTILNFIQMLSGTATVTNKLVKLISQYKTKLLDTRKTIPGFRLAQKYAVRCGGGFNHRIGLFDAYLIKENHIRSAGGIAKAVTKAKKLDS-NKVVEVEVTNLDELNQAIAAKADIVMLDNFSGEDIDIAVSIARGKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKHIKAIDLSLQVQ-----


General information:
TITO was launched using:
RESULT:

Template: 3TQV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1409 -194585 -138.10 -712.77
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -138.10
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_3TQV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TQV-query.scw
PDB file : Tito_Scwrl_3TQV.pdb: