Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIIKSERISLKHLLTVEALTDQEVMGLIRRGQEFKQGANWTPQ--KRQYFATNLFFENSTRTHKSFDVAEKKLGLEVIEFE--ASTSSVQKGETLYDTVLTMSALGVDVAVIRHGDENYYDELIQSKTIQCSIINGGDGSGQHPTQCLLDLMTIYEEFGHFEGLKVAIVGDITHSRVAKSNMQMLKRL-GAQVFFSGPR---------EWYDDEFEVYGHYMPLDELLDQVDVMMMLRVQHERHDGKESFSKEGYHQEHGLTVERAKKLQKHAIIMHPAPVNRDVELADSLVEGLQSRIVQQMSNGVFVRMAILEAVLNGKA
1F1B Chain:A ((7-305))----------KHIISINDLSRDDLNLVLATAAKLK--ANPQPELLKHKVIAS-CFFEASTRTRLSFETSMHRLGASVVGFSDSANTSLGKKGETLADTISVISTY-VDAIVMRHPQEGAA-RLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGRLDNLHVAMVGDLKYGRTVHSLTQALAKFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSIEEVMAEVDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMK---VLH--PLARVDEIATDVDKTPHAWYFQQAGNGIFARQALLALVLN---


General information:
TITO was launched using:
RESULT:

Template: 1F1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1493 36845 24.68 129.28
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : 24.68
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.391

(partial model without unconserved sides chains):
PDB file : Tito_1F1B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F1B-query.scw
PDB file : Tito_Scwrl_1F1B.pdb: