Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFQHIPPYAGDPILSLMEQFNADTRSEKVNLSIGLYYNEDSIVPQLETIIEAQ-KRIEP-K---NGKTKLYLPMEGFKPYREAIQALLFGANSPAVKAGRAVTIQTL--GGSGALKVGADFLKTYFPN-SDVWVSQPTWDNHVAIFN----GAGIKTHFYP-YFDAETRGVDFDGMLSTLKT-LPEQSIVLLHPCCHNPTGADLNPAQWDQVIAVLKDRNLIPFLDIAYQGFGDGMEE-DAYAIRALDQAGLNFIVSNSFSKIFSLYGERVGGLTFVCDDA----------EAAQCTFGQLKATVRRIYSSPPTTGAWLVDEVLNDAELNQQWQGEVKEMRERIIKMRSILKDELTKALPD-----RDFSYLVNQKGMFSYTGLTAEQVDILREEYAIYLVRS-GRICVAGLNMNNVYTVAKAMAEVLAKSVEAA
3MEB Chain:A ((24-446))VFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESG----KPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMFGKDSKAAQEGRI--ASCQSLSGTGSLHIGFEFLHL-WMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSIFLFH-ACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHV--VHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWDHILTAIGMFTFTGLTPEHVDYLKEKWSIYLVKAGGRMSMCGLTESNCDYVAEAIHDAVTKLPF--


General information:
TITO was launched using:
RESULT:

Template: 3MEB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1954 -12589 -6.44 -32.11
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain A : 0.77

3D Compatibility (PKB) : -6.44
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_3MEB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MEB-query.scw
PDB file : Tito_Scwrl_3MEB.pdb: