Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKPLLLVFHPDL--S-QSKVNRALVATLKDQDKIDIVDIQKLYNGSLDIMNDGAIEAQRLISASHIILQFPIYWYSVPPIFKAWMDAVLTRMFYLFYEQEGQHIEGKPLYLHITVGNLSSAYQKLGQNGFTLDELMAPLKATARRCGLIWHPPHVIFNANQLNENDITEQTSLSLKQFEQWGIFNNNSFILVLSQKKRTSEKSEVRTML
3HA2 Chain:B ((1-161))-MQTLIIVAHPELARSNTQPFFKAAIENFS---NVTWHPLVA--------DFNVEQEQSLLLQNDRIILEFPLYWYSAPALLKQWMDTVMTTKFATGH---QYALEGKELGIVVSTGDNGNAFQAGAAEKFTISELMRPFEAFANKTKMMYLPILAVHQFLYLEPDAQQRLLVAYQ----------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3HA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 667 -66629 -99.89 -421.70
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.68

3D Compatibility (PKB) : -99.89
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.68
QMean score : 0.509

(partial model without unconserved sides chains):
PDB file : Tito_3HA2.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3HA2-query.scw
PDB file : Tito_Scwrl_3HA2.pdb: